| Version | 1.3 |
|---|---|
| Publisher | Thomas Abeel |
| Release date | May 17, 2013 |
| Date added | May 17, 2013 |
| Os requirements | Windows 2000, Windows Vista, Windows, Windows 7, Windows XP |
| Requirements | Java 1.6 or later |
| Total downloads | 39 |
| Price | Free |
Description
pppBenchmark provides a large-scale benchmarking study of 17 state-of-the-art PPPs. A multi-faceted evaluation strategy is proposed that can be used as a gold standard for promoter prediction evaluation, allowing authors of promoter prediction software to compare their method to existing methods in a proper way. This evaluation strategy is subsequently used to compare the chosen promoter predictors and an in-depth analysis on predictive performance, promoter class specificity, overlap between predictors, and positional bias of the predictions is conducted.
